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\n \n\n \n \n Hozumi, A., Padma, P., Toda, T., Ide, H., & Inaba, K.\n\n\n \n \n \n \n \n Molecular characterization of axonemal proteins and signaling molecules responsible for chemoattractant-induced sperm activation in Ciona intestinalis.\n \n \n \n \n\n\n \n\n\n\n Cell Motility and the Cytoskeleton, 65(3): 249–267. March 2008.\n \n\n\n\n
\n\n\n\n \n \n \"MolecularPaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{hozumi_molecular_2008,\n\ttitle = {Molecular characterization of axonemal proteins and signaling molecules responsible for chemoattractant-induced sperm activation in \\textit{{Ciona} intestinalis}},\n\tvolume = {65},\n\tissn = {08861544, 10970169},\n\turl = {https://onlinelibrary.wiley.com/doi/10.1002/cm.20258},\n\tdoi = {10.1002/cm.20258},\n\tlanguage = {en},\n\tnumber = {3},\n\turldate = {2021-07-27},\n\tjournal = {Cell Motility and the Cytoskeleton},\n\tauthor = {Hozumi, Akiko and Padma, Potturi and Toda, Tosifusa and Ide, Hiroyuki and Inaba, Kazuo},\n\tmonth = mar,\n\tyear = {2008},\n\tpages = {249--267},\n}\n\n
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\n \n\n \n \n Kondoh, E., Konno, A., Inaba, K., Oishi, T., Murata, M., & Yoshida, M.\n\n\n \n \n \n \n \n Valosin-containing protein/p97 interacts with sperm-activating and sperm-attracting factor (SAAF) in the ascidian egg and modulates sperm-attracting activity.\n \n \n \n \n\n\n \n\n\n\n Development, Growth & Differentiation, 50(8): 665–673. October 2008.\n \n\n\n\n
\n\n\n\n \n \n \"Valosin-containingPaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n  \n \n 1 download\n \n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{kondoh_valosin-containing_2008,\n\ttitle = {Valosin-containing protein/p97 interacts with sperm-activating and sperm-attracting factor ({SAAF}) in the ascidian egg and modulates sperm-attracting activity},\n\tvolume = {50},\n\tissn = {00121592, 1440169X},\n\turl = {https://onlinelibrary.wiley.com/doi/10.1111/j.1440-169X.2008.01064.x},\n\tdoi = {10.1111/j.1440-169X.2008.01064.x},\n\tlanguage = {en},\n\tnumber = {8},\n\turldate = {2021-07-27},\n\tjournal = {Development, Growth \\& Differentiation},\n\tauthor = {Kondoh, Eri and Konno, Aru and Inaba, Kazuo and Oishi, Tohru and Murata, Michio and Yoshida, Manabu},\n\tmonth = oct,\n\tyear = {2008},\n\tpages = {665--673},\n}\n
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\n \n\n \n \n Kowalski, R. K., Shiba, K., Yoshida, M., & Glogowski, J.\n\n\n \n \n \n \n \n Prostaglandins in rainbow trout ( Oncorhynchus mykiss Walbaum, 1792) sperm biology - searching for answers.\n \n \n \n \n\n\n \n\n\n\n Journal of Applied Ichthyology, 24(4): 487–491. August 2008.\n \n\n\n\n
\n\n\n\n \n \n \"ProstaglandinsPaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n  \n \n 1 download\n \n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{kowalski_prostaglandins_2008,\n\ttitle = {Prostaglandins in rainbow trout ( \\textit{{Oncorhynchus} mykiss} {Walbaum}, 1792) sperm biology - searching for answers},\n\tvolume = {24},\n\tissn = {01758659, 14390426},\n\turl = {https://onlinelibrary.wiley.com/doi/10.1111/j.1439-0426.2008.01147.x},\n\tdoi = {10.1111/j.1439-0426.2008.01147.x},\n\tlanguage = {en},\n\tnumber = {4},\n\turldate = {2021-07-27},\n\tjournal = {Journal of Applied Ichthyology},\n\tauthor = {Kowalski, R. K. and Shiba, K. and Yoshida, M. and Glogowski, J.},\n\tmonth = aug,\n\tyear = {2008},\n\tpages = {487--491},\n}\n\n
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\n \n\n \n \n Oku, H., Ishikawa, M., Ogawa, N., Shiba, K., & Yoshida, M.\n\n\n \n \n \n \n \n How to track spermatozoa using high-speed visual feedback.\n \n \n \n \n\n\n \n\n\n\n In 2008 30th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, pages 125–128, Vancouver, BC, August 2008. IEEE\n \n\n\n\n
\n\n\n\n \n \n \"HowPaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n  \n \n 1 download\n \n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@inproceedings{oku_how_2008,\n\taddress = {Vancouver, BC},\n\ttitle = {How to track spermatozoa using high-speed visual feedback},\n\tisbn = {978-1-4244-1814-5},\n\turl = {http://ieeexplore.ieee.org/document/4649106/},\n\tdoi = {10.1109/IEMBS.2008.4649106},\n\turldate = {2021-07-27},\n\tbooktitle = {2008 30th {Annual} {International} {Conference} of the {IEEE} {Engineering} in {Medicine} and {Biology} {Society}},\n\tpublisher = {IEEE},\n\tauthor = {Oku, Hiromasa and Ishikawa, Masatoshi and Ogawa, Naoko and Shiba, Kogiku and Yoshida, Manabu},\n\tmonth = aug,\n\tyear = {2008},\n\tpages = {125--128},\n}\n\n
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\n \n\n \n \n Sasakura, Y., Konno, A., Mizuno, K., Satoh, N., & Inaba, K.\n\n\n \n \n \n \n \n Enhancer detection in the ascidian Ciona intestinaliswith transposase-expressing lines of Minos.\n \n \n \n \n\n\n \n\n\n\n Developmental Dynamics, 237(1): 39–50. January 2008.\n \n\n\n\n
\n\n\n\n \n \n \"EnhancerPaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{sasakura_enhancer_2008,\n\ttitle = {Enhancer detection in the ascidian \\textit{{Ciona} intestinalis}with transposase-expressing lines of \\textit{{Minos}}},\n\tvolume = {237},\n\tissn = {10588388, 10970177},\n\turl = {https://onlinelibrary.wiley.com/doi/10.1002/dvdy.21333},\n\tdoi = {10.1002/dvdy.21333},\n\tlanguage = {en},\n\tnumber = {1},\n\turldate = {2021-07-27},\n\tjournal = {Developmental Dynamics},\n\tauthor = {Sasakura, Yasunori and Konno, Aru and Mizuno, Katsutoshi and Satoh, Nori and Inaba, Kazuo},\n\tmonth = jan,\n\tyear = {2008},\n\tpages = {39--50},\n}\n\n
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\n \n\n \n \n Satou, Y., Mineta, K., Ogasawara, M., Sasakura, Y., Shoguchi, E., Ueno, K., Yamada, L., Matsumoto, J., Wasserscheid, J., Dewar, K., Wiley, G. B, Macmil, S. L, Roe, B. A, Zeller, R. W, Hastings, K. E., Lemaire, P., Lindquist, E., Endo, T., Hotta, K., & Inaba, K.\n\n\n \n \n \n \n \n Improved genome assembly and evidence-based global gene model set for the chordate Ciona intestinalis: new insight into intron and operon populations.\n \n \n \n \n\n\n \n\n\n\n Genome Biology, 9(10): R152. 2008.\n \n\n\n\n
\n\n\n\n \n \n \"ImprovedPaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{satou_improved_2008,\n\ttitle = {Improved genome assembly and evidence-based global gene model set for the chordate \\textit{{Ciona} intestinalis}: new insight into intron and operon populations},\n\tvolume = {9},\n\tissn = {1465-6906},\n\tshorttitle = {Improved genome assembly and evidence-based global gene model set for the chordate {Ciona} intestinalis},\n\turl = {http://genomebiology.biomedcentral.com/articles/10.1186/gb-2008-9-10-r152},\n\tdoi = {10.1186/gb-2008-9-10-r152},\n\tlanguage = {en},\n\tnumber = {10},\n\turldate = {2021-07-27},\n\tjournal = {Genome Biology},\n\tauthor = {Satou, Yutaka and Mineta, Katsuhiko and Ogasawara, Michio and Sasakura, Yasunori and Shoguchi, Eiichi and Ueno, Keisuke and Yamada, Lixy and Matsumoto, Jun and Wasserscheid, Jessica and Dewar, Ken and Wiley, Graham B and Macmil, Simone L and Roe, Bruce A and Zeller, Robert W and Hastings, Kenneth EM and Lemaire, Patrick and Lindquist, Erika and Endo, Toshinori and Hotta, Kohji and Inaba, Kazuo},\n\tyear = {2008},\n\tpages = {R152},\n}\n\n
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\n \n\n \n \n Shiba, K., Baba, S. A., Inoue, T., & Yoshida, M.\n\n\n \n \n \n \n \n Ca2+ bursts occur around a local minimal concentration of attractant and trigger sperm chemotactic response.\n \n \n \n \n\n\n \n\n\n\n Proceedings of the National Academy of Sciences, 105(49): 19312–19317. December 2008.\n Publisher: National Academy of Sciences Section: Biological Sciences\n\n\n\n
\n\n\n\n \n \n \"Ca2+Paper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n  \n \n abstract \n \n\n \n  \n \n 1 download\n \n \n\n \n \n \n \n \n \n \n\n  \n \n \n \n \n \n \n \n \n \n \n \n \n\n\n\n
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@article{shiba_ca2_2008,\n\ttitle = {Ca2+ bursts occur around a local minimal concentration of attractant and trigger sperm chemotactic response},\n\tvolume = {105},\n\tcopyright = {© 2008 by The National Academy of Sciences of the USA},\n\tissn = {0027-8424, 1091-6490},\n\turl = {https://www.pnas.org/content/105/49/19312},\n\tdoi = {10.1073/pnas.0808580105},\n\tabstract = {Ca2+ is known to have important roles in sperm chemotaxis, although the relationship between intracellular Ca2+ concentration ([Ca2+]i) and modulation of the swimming and chemotactic behavior of spermatozoa has not been elucidated. Using a high-speed Ca2+ imaging system, we examined the chemotactic behavior and [Ca2+]i in individual ascidian sperm cells exhibiting chemotactic responses toward sperm activating and attracting factor (SAAF), a chemoattractant released by eggs. In this study, we found that transient [Ca2+]i increased in the flagellum (Ca2+ bursts) concomitantly with a change in the swimming direction in an SAAF gradient field. During the initial phase of the Ca2+ bursts, the flagellum of the spermatozoon exhibited highly asymmetric waveforms enabling the quick turning of the swimming path. However, the flagellum subsequently changed to symmetric beating, causing the spermatozoon to swim straight. Interestingly, during such responses, [Ca2+]i remained higher than the basal level, indicating that the series of responses was not simply determined by Ca2+ concentrations. Also, we found that Ca2+ bursts were consistently evoked at points at which the spermatozoon attained around a temporally minimal value for a given SAAF concentration. We concluded that Ca2+ bursts induced around a local minimal SAAF concentration trigger a sequence of flagellar responses comprising quick turning followed by straight swimming to direct spermatozoa efficiently toward eggs.},\n\tlanguage = {en},\n\tnumber = {49},\n\turldate = {2021-07-27},\n\tjournal = {Proceedings of the National Academy of Sciences},\n\tauthor = {Shiba, Kogiku and Baba, Shoji A. and Inoue, Takafumi and Yoshida, Manabu},\n\tmonth = dec,\n\tyear = {2008},\n\tpmid = {19047630},\n\tnote = {Publisher: National Academy of Sciences\nSection: Biological Sciences},\n\tkeywords = {ascidian, calcium, chemotaxis, fertilization, flagella},\n\tpages = {19312--19317},\n}\n\n
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\n Ca2+ is known to have important roles in sperm chemotaxis, although the relationship between intracellular Ca2+ concentration ([Ca2+]i) and modulation of the swimming and chemotactic behavior of spermatozoa has not been elucidated. Using a high-speed Ca2+ imaging system, we examined the chemotactic behavior and [Ca2+]i in individual ascidian sperm cells exhibiting chemotactic responses toward sperm activating and attracting factor (SAAF), a chemoattractant released by eggs. In this study, we found that transient [Ca2+]i increased in the flagellum (Ca2+ bursts) concomitantly with a change in the swimming direction in an SAAF gradient field. During the initial phase of the Ca2+ bursts, the flagellum of the spermatozoon exhibited highly asymmetric waveforms enabling the quick turning of the swimming path. However, the flagellum subsequently changed to symmetric beating, causing the spermatozoon to swim straight. Interestingly, during such responses, [Ca2+]i remained higher than the basal level, indicating that the series of responses was not simply determined by Ca2+ concentrations. Also, we found that Ca2+ bursts were consistently evoked at points at which the spermatozoon attained around a temporally minimal value for a given SAAF concentration. We concluded that Ca2+ bursts induced around a local minimal SAAF concentration trigger a sequence of flagellar responses comprising quick turning followed by straight swimming to direct spermatozoa efficiently toward eggs.\n
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\n \n\n \n \n Yoshida, M., Shiba, K., Yoshida, K., Tsuchikawa, H., Ootou, O., Oishi, T., & Murata, M.\n\n\n \n \n \n \n \n Ascidian sperm activating and attracting factor: Importance of sulfate groups for the activities and implication of its putative receptor.\n \n \n \n \n\n\n \n\n\n\n FEBS Letters, 582(23): 3429–3433. October 2008.\n \n\n\n\n
\n\n\n\n \n \n \"AscidianPaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n  \n \n abstract \n \n\n \n  \n \n 1 download\n \n \n\n \n \n \n \n \n \n \n\n  \n \n \n \n \n \n \n \n \n \n \n \n \n\n\n\n
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@article{yoshida_ascidian_2008,\n\ttitle = {Ascidian sperm activating and attracting factor: {Importance} of sulfate groups for the activities and implication of its putative receptor},\n\tvolume = {582},\n\tissn = {0014-5793},\n\tshorttitle = {Ascidian sperm activating and attracting factor},\n\turl = {https://www.sciencedirect.com/science/article/pii/S0014579308007382},\n\tdoi = {10.1016/j.febslet.2008.09.006},\n\tabstract = {The sperm activating and attracting factor (SAAF) from the eggs of the ascidian Ciona intestinalis was identified as the sulfated polyhydroxysterol,3α,4β,7α,26-tetrahydroxy-5α-cholestane-3,26-disulfate. We present a functional analysis of SAAF derivatives that reveals the roles of the various SAAF functional groups. Optical isomerism does not affect SAAF activities. Hydrolysis on one side, i.e. at the sulfate groups of SAAF, decreases the sperm-activating and sperm-attracting activities, while hydrolysis on both sides resulted in the loss of both activities. Biotinylated-SAAF lost its sperm-activating ability, but retained sperm-binding and chemotactic abilities. Thus, the sulfate groups of SAAF are responsible for these activities.},\n\tlanguage = {en},\n\tnumber = {23},\n\turldate = {2021-07-27},\n\tjournal = {FEBS Letters},\n\tauthor = {Yoshida, Manabu and Shiba, Kogiku and Yoshida, Kaoru and Tsuchikawa, Hiroshi and Ootou, Ouichirou and Oishi, Toru and Murata, Michio},\n\tmonth = oct,\n\tyear = {2008},\n\tkeywords = {Ascidian, Chemoattractant, Fertilization, Sperm chemotaxis, Sulfated polyhydroxysterol},\n\tpages = {3429--3433},\n}\n\n
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\n The sperm activating and attracting factor (SAAF) from the eggs of the ascidian Ciona intestinalis was identified as the sulfated polyhydroxysterol,3α,4β,7α,26-tetrahydroxy-5α-cholestane-3,26-disulfate. We present a functional analysis of SAAF derivatives that reveals the roles of the various SAAF functional groups. Optical isomerism does not affect SAAF activities. Hydrolysis on one side, i.e. at the sulfate groups of SAAF, decreases the sperm-activating and sperm-attracting activities, while hydrolysis on both sides resulted in the loss of both activities. Biotinylated-SAAF lost its sperm-activating ability, but retained sperm-binding and chemotactic abilities. Thus, the sulfate groups of SAAF are responsible for these activities.\n
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\n \n\n \n \n 笹倉靖徳, 稲葉一男, 佐藤矩行, & 赤坂甲治\n\n\n \n \n \n \n NBRP(ナショナルバイオリソースプロジェクト)紹介 カタユウレイボヤ・ニッポンウミシダ -海産無脊椎動物のリソース展開-.\n \n \n \n\n\n \n\n\n\n 季刊 Biophilia, 4-4: 16. 2008.\n \n\n\n\n
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@article{_nbrp_2008,\n\ttitle = {{NBRP}(ナショナルバイオリソースプロジェクト)紹介 カタユウレイボヤ・ニッポンウミシダ -海産無脊椎動物のリソース展開-},\n\tvolume = {4-4},\n\tjournal = {季刊 Biophilia},\n\tauthor = {{笹倉靖徳} and {稲葉一男} and {佐藤矩行} and {赤坂甲治}},\n\tyear = {2008},\n\tpages = {16},\n}\n\n
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